Phylip


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Collapse  v.1.2

Describing haplotypes from sequence alignments. COLLAPSE is a simple tool for collapsing sequences to haplotypes (unique sequences). It can read DNA sequence alignments in NEXUS or PHYLIP "sequential" format.

NJPlot  v.2.3

Create phylogenetic trees with this tool. NJplot is a tree drawing software able to draw any phylogenetic tree expressed in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP package).





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Unrooted  v.1.0

Unrooted is a tree drawing software able to draw any binary tree expressed in the standard phylogenetic tree format (e.g., the format used by the PHYLIP package). Trees are drawn in an unrooted way, that is, using a circular shape,

TreeStat  v.1.2

Can process a set of trees in a PHYLIP or NEXUS format tree file. TreeStat is an software that can process a set of trees in a PHYLIP or NEXUS format tree file and calculate a number of summary statistics for each.

SeqVerter  v.2.0.4.3

SeqVerter is a free sequence file format conversion utility by GeneStudio, Inc. SeqVerter encapsulates a small subset of the features offered by the GeneStudio™ Pro suite of programs.

TreeView  v.1. 6. 2006

TreeView is a program to view phylogenetic trees in your computer. A phylogenetic tree is a graphical representation of a hypothesis about the evolution of a species, with branches that separate, hybridize, or become terminated by extinction.

Unipro UGENE  v.1. 9. 2002

UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install.

GeneStudio  v.2.1.2.4

GeneStudio™ Pro is a modern suite of molecular biology applications for the Windows platform built on sequence format conversion engine, SeqVerter™.

UGENE  v.1.9.8

Unipro UGENE is a free visual program solution for DNA and protein sequence analysis. A free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install.

ProtTest  v.3.4

Selection of best-fit models of protein evolution. PROTTEST (ModelTest's relative) is a software for selecting the model of protein evolution that best fits a given set of sequences (alignment).

Geneious Basic  v.5.6.4

Geneious Basic is a software that speeds up and simplifies research in molecular biology and biochemistry. Geneious is a useful,

DAMBE (Data Analysis and Molecular Biology and Evolution)  v.5.2.30

DAMBE (Data Analysis and Molecular Biology and Evolution) help you with data analysis and molecular biology and evolution.Here is a short summary of DAMBE functions 1. Sequence alignment * General sequence alignment with nucleotide and amino acid

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